Apps with 'Bioinformatics' feature

All apps in Apps with 'Bioinformatics' feature category. Use the filters below to narrow down your search. 
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  1. AliView icon
     3 likes

    AliView is yet another alignment viewer and editor, but this is probably one of the fastest and most intuitive to use, not so bloated and hopefully to your liking.

    Cost / License

    • Free
    • Open Source

    Platforms

    • Mac
    • Windows
    • Linux
    Unlimited mouse wheel zoom in/out to see whole alignment
    Alternative Color schemes (SeaView)
    ClustalX consensus color scheme
    +1
    View nucleotides colored as translated Amino Acids
    4 alternatives
  2. Cytoscape icon
     11 likes

    Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.

    Cost / License

    • Free
    • Open Source

    Platforms

    • Mac
    • Windows
    • Linux
    Cytoscape screenshot 1
    Cytoscape screenshot 1
    Cytoscape screenshot 2
    17 alternatives
  3. Tabnetviz icon
     4 likes

    table-based network visualizer, a command-line tool for producing static network visualizations from a node table and an edge table.

    Cost / License

    Application type

    Platforms

    • Mac
    • Windows
    • Linux
    • Python
    Network visualization generated by Tabnetviz.
    Flowchart showing the function of Tabnetviz.
    Gene coexpression network visualized by Tabnetviz.
    6 alternatives
  4. Genophore icon
     2 likes

    Genophore is an application for searching and designing proteins. It also provides a suite of bioinformatics utilities and collaboration tools.

    Cost / License

    • Free Personal
    • Proprietary

    Platforms

    • Online
    • Self-Hosted
    • Software as a Service (SaaS)
    Genophore landing page
    Genophore protein annotation and schematics
    DNA vector visualization
    27 alternatives
  5. UGENE icon
     3 likes

    UGENE is free open-source cross-platform bioinformatics software.

    Cost / License

    • Free
    • Open Source

    Platforms

    • Mac
    • Windows
    • Linux
    UGENE screenshot 1
    UGENE screenshot 1
    UGENE screenshot 2
    +4
    UGENE screenshot 3
    25 alternatives
  6. EteRNA icon
     2 likes

    Eterna is a citizen science game where players learn to design RNA molecules for medical research by solving puzzles. Complete these puzzles to unlock lab access and participate in challenges where you can invent medicine!.

    Cost / License

    • Free
    • Open Source

    Platforms

    • Online
    EteRNA screenshot 1
    EteRNA screenshot 1
    5 alternatives
  7. Phylo icon
     2 likes

    Though it may appear to be just a game, Phylo is actually a framework for harnessing the computing power of mankind to solve a common problem; Multiple Sequence Alignments.

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Online
    Phylo screenshot 1
    9 alternatives
  8. GraphXR icon
     1 like

    Kineviz GraphXR is a browser-based visualization platform for interactive analysis of big, high dimensional, and or connected data.

    Cost / License

    • Free Personal
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    • Online
    • iPad
    • Self-Hosted
    • Software as a Service (SaaS)
    People, objects, locations, and events from a crime dataset`
    Time series analysis of air traffic
    Contact tracing for COVID-19
    15 alternatives
  9. DNA Baser icon
     1 like

    DNA Baser Sequence Assembler is revolutionary bioinformatics software for manual and automatic DNA sequence assembly , DNA sequence analysis, contig editing, file format conversion and mutation detection.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Windows
    DNA Baser screenshot 1
    3 alternatives
  10. BioSciTools icon
     1 like

    BioSciTools (Bioinformatics Science Tools), a desktop program developed based on Java 11, aims to make new exploration and contribution to the development of bioinformatics, and realize data analysis and visualization in the fields of sequence analysis, multi-omics...

    Cost / License

    • Free
    • Open Source (MIT)

    Application type

    Platforms

    • Windows
    BioSciTools-Home
    BioSciTools-DNA
    BioSciTools-Stat
    +3
    BioSciTools-Genomics
  11. Graphia icon
     1 like

    Graphia is a powerful open source visual analytics application developed to aid the interpretation of large and complex datasets.

    Cost / License

    Platforms

    • Mac
    • Windows
    • Linux
    Graphia screenshot 1
    Graphia screenshot 1
    Graphia screenshot 2
    9 alternatives
  12. Clustal Omega is a multiple sequence alignment program. It produces biologically meaningful multiple sequence alignments of divergent sequences. Evolutionary relationships can be seen via viewing Cladograms or Phylograms.

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Online
    3 alternatives
  13. Snthesis icon
     1 like

    The Snthesis Bio platform automatically integrates and harmonizes all your research data. Source agnostic. Search everything.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Online
    • Software as a Service (SaaS)
    Ingest anything, from any source.
    Search all your data together. All of it.
    11 alternatives
  14. Mendelgen icon
     3 likes

    Mendelgen is an online DNA vector editing and manipulation tool. It offers features like MSA alignment, codon optimization, feature detection, and more. It's wrapped in a beautiful and intuitive design to make your experience easy and enjoyable.

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Online
    View your plasmid maps in dark mode
    Simulate gels
    Easy-to-use DNA editing
    29 alternatives
  15. With a rich palette of plot types, filter devices and an editable table of data Vortex enables your scientists to rapidly identify outliers and spot trends in multi-dimensional data.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    • Online
    Dotmatics Vortex screenshot 1
    Dotmatics Vortex screenshot 1
    Dotmatics Vortex screenshot 2
    10 alternatives
  16. Pathomx icon
     1 like

    Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis.

    Cost / License

    • Free
    • Open Source

    Alerts

    • Discontinued

    Platforms

    • Mac
    • Windows
    Workflow editor and spectra exclusion tool
    3 alternatives
  17. Fix42 icon
     Like

    Fix42 is a growing collection of free online tools for everyday digital tasks. From viewing CSV files and converting images to learning German and exploring bioinformatics data, we provide simple solutions without sign-ups or complicated processes.

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Online
  18. Clone Manager is a commercial bioinformatics software work suite of Sci-Ed, that supports molecular biologists with data management and allows to perform certain in silico preanalysis.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Windows
    2 alternatives
  19. DNAssist icon
     Like

    DNAssist provides an intuitive, single interface within which sequence files are displayed, edited and analyzed. The user can customize the display in editor windows by selecting the font, font size, and line length.

    Cost / License

    Platforms

    • Windows
    DNAssist screenshot 1
    13 alternatives
  20. The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches.

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Online
    1 alternatives
  21. QIAGEN CLC Main Workbench is ideal for DNA, RNA, & protein sequence data analysis with a wide variety of features, no advanced computer skills required! The workbench is available for Windows, Mac OS X, and Linux platforms.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    CLC Main Workbench screenshot 1
    29 alternatives
  22. The Integrative Genomics Viewer (IGV) is a high-performance, easy-to-use, interactive tool for the visual exploration of genomic data. It supports flexible integration of all the common types of genomic data and metadata, investigator-generated or publicly available, loaded from...

    Cost / License

    • Free
    • Open Source (MIT)

    Platforms

    • Mac
    • Windows
    • Linux
    • Online
     Integrative Genomics Viewer (IGV) screenshot 1
     Integrative Genomics Viewer (IGV) screenshot 1
     Integrative Genomics Viewer (IGV) screenshot 2
  23. Biostars icon
     Like

    This site's focus is bioinformatics, computational genomics and biological data analysis. We welcome posts that are detailed and specific, written clearly and simply.

    Cost / License

    • Free
    • Open Source (MIT)

    Application type

    Platforms

    • Online
    5 alternatives
  24.  Like

    Boxshade is a program for creating good-looking printouts from alignments of multiple protein or DNA sequences. The program does no alignment by itself, it takes as input a file preprocessed by a multiple alignment program or a multiple sequence editor, such as ClustalOmega.

    Cost / License

    Platforms

    • Mac
    • Windows
    • Linux
    • Online
    4 alternatives
  25. YASARA icon
     Like

    YASARA (Yet Another Scientific Artificial Reality Application) is a molecular-graphics, -modeling and -simulation program for Windows, Linux, MacOS and Android developed since 1993, that finally makes it really easy to answer your questions.

    Cost / License

    • Freemium
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    • Android