CLC Main Workbench is described as 'QIAGEN CLC Main Workbench is ideal for DNA, RNA, & protein sequence data analysis with a wide variety of features, no advanced computer skills required! The workbench is available for Windows, Mac OS X, and Linux platforms' and is an app in the Education & Reference category. There are more than 25 alternatives to CLC Main Workbench for a variety of platforms, including Windows, Mac, Linux, Online / Web-based and Self-Hosted solutions. The best alternative is DNADynamo. It's not free, so if you're looking for a free alternative, you could try Rasmol or Chromas. Other great apps like CLC Main Workbench are Benchling (Free Personal), SnapGene Viewer (Free Personal), Clustal X (Free) and GeneDoc (Free).
DNADynamo - for Windows, OSX and Linux. Download it now for abi/scf trace alignments, sub cloning and plasmid management, blast/sequence retrieval, sequence annotation and structure viewing - all in one integrated and easy to use bioinformatics program.
RasMol is a computer program written for molecular graphics visualization intended and used primarily for the depiction and exploration of biological macromolecule structures, such as those found in the Protein Data Bank.
A full featured multiple sequence alignment editor, analyser and shading utility for Windows. • Data analysis and visualization • Score assisted manual alignment • Paginated printouts • Windows based • Highly configurable • Exported figures • Phylognetic tree support