Clustal Omega Alternatives

Clustal Omega is described as 'multiple sequence alignment program. It produces biologically meaningful multiple sequence alignments of divergent sequences. Evolutionary relationships can be seen via viewing Cladograms or Phylograms' and is an website in the education & reference category. There are three alternatives to Clustal Omega, not only websites but also apps for Windows, Linux and Mac. The best alternative is UGENE, which is both free and Open Source. Other great sites and apps similar to Clustal Omega are BioEdit and Clustal X.

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Clustal Omega

Free • Proprietary
Online

Clustal Omega is a multiple sequence alignment program. It produces biologically meaningful multiple sequence alignments of...

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UGENE
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Free • Open Source
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25 alternatives to UGENE
UGENE is free open-source cross-platform bioinformatics software.
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Bioinformatics
BioEdit
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Free • Proprietary
Windows
28 alternatives to BioEdit
BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP/7. An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences relatively easy on your desktop computer.

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Discontinued
The program is no longer maintained. Last version, 7.2.5, released in December 2013, can be still downloaded from the official website.
Clustal X
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Free • Proprietary
Mac
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8 alternatives to Clustal X
Multiple sequence alignment software.

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UGENE

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BioEdit

Clustal X