UGENE Alternatives
UGENE is described as 'is free open-source cross-platform bioinformatics software' and is an app in the education & reference category. There are more than 10 alternatives to UGENE for a variety of platforms, including Windows, Linux, Mac, Online / Web-based and Self-Hosted solutions. The best alternative is Rasmol, which is both free and Open Source. Other great apps like UGENE are Clustal Omega, Geneious, TreeView and Ridom TraceEdi.
RasMol is a computer program written for molecular graphics visualization intended and used primarily for the depiction and exploration of biological macromolecule structures, such as those found in the Protein Data Bank.
Clustal Omega is a multiple sequence alignment program. It produces biologically meaningful multiple sequence alignments of divergent sequences. Evolutionary relationships can be seen via viewing Cladograms or Phylograms.
Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!
Features
Tree drawing software for Apple Macintosh and Windows.
Ridom TraceEdit is a cross-platform graphical DNA trace viewer and editor. TraceEdit displays the chromatogram files from Applied Biosystems automated sequencers and files in the Staden SCF format.
A full featured multiple sequence alignment editor, analyser and shading utility for Windows.
Archaeopteryx is a software tool for the visualization, analysis, and editing of potentially large and highly annotated phylogenetic trees. Archaeopteryx (the successor to ATV) is entirely written in the Java programming language (it is based on the forester libraries).
Multiple sequence alignment software.
TreeView X is an open source program to display phylogenetic trees on Linux, Unix, Mac OS X, and Windows platforms. It can read and display NEXUS and Newick format tree files (such as those output by PAUP*, .
SnapGene Viewer is revolutionary software that allows molecular biologists to create, browse, and share richly annotated DNA sequence files up to 1 Gb in length.
