Geneious Alternatives

Geneious is described as 'Combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!' and is an app. There are more than 25 alternatives to Geneious for a variety of platforms, including Windows, Mac, Linux, Web-based and Self-Hosted apps. The best Geneious alternative is AliView, which is both free and Open Source. Other great apps like Geneious are Chromas, BioEdit, CLC bio and Genophore.

Geneious iconGeneious
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Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!

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Geneious alternatives page was last updated Nov 5, 2024
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Alternatives
  1. AliView icon

    AliView

     3 likes
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    AliView is yet another alignment viewer and editor, but this is probably one of the fastest and most intuitive to use, not so bloated and hopefully to your liking.

    4 AliView alternatives

    License model

    • Free • Open Source

    Platforms

    • Mac
    • Windows
    • Linux
    Unlimited mouse wheel zoom in/out to see whole alignment

    AliView Features

    1.  Bioinformatics

    AliView VS Geneious

     

    • AliView is the most popular Windows, Mac & Linux alternative to Geneious.

    • AliView is the most popular Open Source & free alternative to Geneious.

    • AliView is Free and Open SourceGeneious is Paid and Proprietary
  2. Chromas icon

    Chromas

     1 like
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    Two software applications are available from Technelysium: Chromas and ChromasPro.

    27 Chromas alternatives

    License model

    • Freemium • Proprietary

    Platforms

    • Windows
    Chromas screenshot 1

    Chromas Features

    1.  Batch processing

    Chromas VS Geneious

     
  4. BioEdit icon

    BioEdit

     2 likes
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    BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP/7. An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences relatively easy on your desktop computer.

    28 BioEdit alternatives

    License model

    • Free • Proprietary

    Platforms

    • Windows
    BioEdit screenshot 1
    Discontinued

    The program is no longer maintained. Last version, 7.2.5, released in December 2013, can be still downloaded from the official website.

    BioEdit VS Geneious

     
  5. CLC bio icon

    CLC bio

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    DNA analysis for the workbench.

    23 CLC bio alternatives

    License model

    Platforms

    • Windows

    CLC bio Features

    1.  Bioinformatics

    CLC bio VS Geneious

     

    • Most users think CLC bio is a great Geneious alternative.

    • CLC bio is the most popular commercial alternative to Geneious.

    • CLC bio is Paid and ProprietaryGeneious is also Paid and Proprietary
  6. Genophore icon

    Genophore

     2 likes
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    Genophore is an application for searching and designing proteins. It also provides a suite of bioinformatics utilities and collaboration tools.

    27 Genophore alternatives

    License model

    • Free Personal • Proprietary

    Platforms

    • Online
    • Self-Hosted
    • Software as a Service (SaaS)
    Genophore landing page

    Genophore Features

    1.  Bioinformatics
    2.  Online collaboration
    3.  Cloud based

    Genophore VS Geneious

     

    • Genophore is the most popular Web-based, SaaS & Self-Hosted alternative to Geneious.

    • Genophore is Free Personal and ProprietaryGeneious is Paid and Proprietary
  7. UGENE icon

    UGENE

     3 likes
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    UGENE is free open-source cross-platform bioinformatics software.

    25 UGENE alternatives

    License model

    • Free • Open Source

    Platforms

    • Mac
    • Windows
    • Linux
    UGENE screenshot 1

    UGENE Features

    1.  Bioinformatics

    UGENE VS Geneious

     
  9. Benchling icon

    Benchling

     12 likes
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    Online lab notebook software, including DNA design tools.

    26 Benchling alternatives

    License model

    • Free Personal • Proprietary

    Platforms

    • Online
    Benchling screenshot 1

    Benchling Features

    1.  Automatic Alignment
    2.  Compatible with SnapGene files
    3.  Notebook
    4.  Electrophoresis Simulation

    Benchling VS Geneious

     
  10. ApE - A plasmid Editor icon

    ApE - A plasmid Editor

     2 likes
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    Software for viewing, editing and analyzing plasmid sequences.

    23 ApE - A plasmid Editor alternatives

    License model

    • Free • Proprietary

    Platforms

    • Mac
    • Windows
    Highlights and draws graphic maps using feature annotations from genbank and embl files

    ApE - A plasmid Editor VS Geneious

     
    Comments about ApE - A plasmid Editor as an Alternative to Geneious
    Guest
    Positive •Nov 5, 2024
    0

    Free, open source and actively developed.

    Geneious Icon
    ApE - A plasmid Editor icon
    • ApE - A plasmid Editor is Free and ProprietaryGeneious is Paid and Proprietary
  11. DNADynamo icon

    DNADynamo

     3 likes
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    DNADynamo - for Windows, OSX and Linux. Download it now for abi/scf trace alignments, sub cloning and plasmid management, blast/sequence retrieval, sequence annotation and structure viewing - all in one integrated and easy to use bioinformatics program.

    26 DNADynamo alternatives

    License model

    Platforms

    • Mac
    • Windows
    • Linux

    DNADynamo Features

    1.  Sequencing

    DNADynamo VS Geneious

     
  12. Clustal X icon

    Clustal X

     1 like
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    Multiple sequence alignment software.

    8 Clustal X alternatives

    License model

    • Free • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux

    Clustal X VS Geneious

     
  13. Ridom TraceEdi icon

    Ridom TraceEdi

     1 like
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    Ridom TraceEdit is a cross-platform graphical DNA trace viewer and editor. TraceEdit displays the chromatogram files from Applied Biosystems automated sequencers and files in the Staden SCF format.

    9 Ridom TraceEdi alternatives

    License model

    • Free • Proprietary

    Platforms

    • Windows
    • Linux
    Ridom TraceEdi screenshot 1

    Ridom TraceEdi VS Geneious

     
  14. GeneDoc icon

    GeneDoc

     1 like
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    A full featured multiple sequence alignment editor, analyser and shading utility for Windows.

    6 GeneDoc alternatives

    License model

    • Free • Proprietary

    Platforms

    • Windows
    GeneDoc screenshot 1

    GeneDoc VS Geneious

     
12 of 28 Geneious alternatives