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Cytoscape

Cytoscape is an open source software platform for visualizing complex networks and integrating...

Free Open Source
Mac
Windows
Linux

Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.

Cytoscape supports many use cases in molecular and systems biology, genomics, and proteomics:

Load molecular and genetic interaction data sets in many formats
Project and integrate global datasets and functional annotations
Establish powerful visual mappings across these data
Perform advanced analysis and modeling using Cytoscape plugins
Visualize and analyze human-curated pathway datasets such as Reactome or KEGG. More Info »

Link to official Cytoscape site

Official Website

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Category

Social & Communications

Tags

visualization integration bioinformatics social-network expression

Cytoscape was added by saurabhgayali in Jun 2012 and the latest update was made in Sep 2018. The list of alternatives was updated Aug 2015 There is a history of all activites on Cytoscape in our Activity Log. It's possible to update the information on Cytoscape or report it as discontinued, duplicated or spam.

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