Alternatives to Cytoscape for all platforms with any license

  • KeyLines

    KeyLines is a JavaScript toolkit for building high-performance network visualization applications quickly.

    Commercial Mac OS X Windows Linux Web Android ... iPhone Android Tablet iPad

    KeyLines icon
  • NodeXL

    NodeXL is a free, open-source template for Microsoft® Excel® 2007 and 2010 that makes it easy to explore network graphs. With NodeXL, you can enter a network...

    Free Open Source Windows Microsoft Office Excel

    No features added Add a feature

    NodeXL icon
  • Neoclipse

    Neoclipse is a standalone workbench application to interact with Neo4j (database directory or server). It supports Cypher, index searches, visualisation, graph updates.

    Free Open Source Windows

    No features added Add a feature

    Neoclipse icon
  • Wandora

    Wandora is a general purpose information extraction, management and publishing application based on Topic Maps and Java. Wandora has graphical user interface, layered...

    Free Open Source Mac OS X Windows Linux

    No features added Add a feature

    Wandora icon
  • Polinode

    Polinode is a tool that makes it easy to perform powerful network analysis. You can either upload your own network data or use the integrated relationship-based survey...

    Commercial Web

    Polinode icon
  • Touchgraph Navigator

    TouchGraph is the producer of data visualization software TouchGraph Navigator 2. With TouchGraph Navigator 2, users can upload data and create "interactive network...

    Commercial Windows Linux

    No features added Add a feature

    Touchgraph Navigator icon
  • Pathomx

    Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended...

    Free Open Source Mac OS X Windows

    No features added Add a feature

    Pathomx icon
    • Discontinued Official website unavailable.
  • Prefuse

    the prefuse visualization toolkit Prefuse is a set of software tools for creating rich interactive data visualizations. The original prefuse toolkit provides a...

    Free Open Source Mac OS X Windows Linux

    No features added Add a feature

    Prefuse icon
  • Socilyzer

    Web-based tool for conducting a social network analysis: from data collection to graph visualization and analysis.

    Freemium Web

    No features added Add a feature

    Socilyzer icon
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