Cytoscape is described as 'Open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web' and is an app in the social & communications category. There are more than 10 alternatives to Cytoscape for a variety of platforms, including Windows, Mac, Linux, Web-based and iPad apps. The best Cytoscape alternative is Gephi, which is both free and Open Source. Other great apps like Cytoscape are ikolinks, NodeXL, Wandora.org and VOSviewer.
TouchGraph is the producer of data visualization software TouchGraph Navigator 2. With TouchGraph Navigator 2, users can upload data and create "interactive network visualizations."[1] Users can purchase licenses for either a TouchGraph Navigator Desktop version or...
Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis.
TextQuery is a desktop app that lets you import data file as a table, query it using SQL, and create stunning charts from those results.
Kenelyze is a visual analytics platform which allows anyone to create fully interactive network maps on the fly using any dataset.
Web-based tool for conducting a social network analysis: from data collection to graph visualization and analysis.
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