Apps similar to Cytoscape include Gephi, which is free and open source. Other options are Linkurious, ikolinks, VOSviewer and NodeXL. You can choose from more than 10 Diagram Editors like Cytoscape for Windows, Mac, Linux, the web and iPad.
TouchGraph is the producer of data visualization software TouchGraph Navigator 2. With TouchGraph Navigator 2, users can upload data and create "interactive network visualizations."[1] Users can purchase licenses for either a TouchGraph Navigator Desktop version or...
Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis.
TextQuery is a desktop app that lets you import data file as a table, query it using SQL, and create stunning charts from those results.
Kenelyze is a visual analytics platform which allows anyone to create fully interactive network maps on the fly using any dataset.
Web-based tool for conducting a social network analysis: from data collection to graph visualization and analysis.
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