Gephi is described as 'open-source software for visualizing and analyzing large networks graphs'. There are more than 25 alternatives to Gephi for a variety of platforms, including Windows, Online / Web-based, Mac, Linux and iPad. The best alternative is yEd Graph Editor, which is free. Other great apps like Gephi are PlantUML (Free, Open Source), Penpot (Free, Open Source), Tableau (Paid) and Graphviz (Free, Open Source).
PlantUML is an open-source tool that uses simple textual descriptions to draw UML diagrams. The generator can be run anywhere within JVM and integrated with various application such as wiki, text editor, IDE, programming language, documentation generator, and others.
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PlantUML vs Gephi opinions
pros, cons and recent comments
PlantUML does not allow to import, visualize, manipulate graphs.
Penpot is the first Open Source design and prototyping platform meant for cross-domain teams. Non dependent on operating systems, Penpot is web based and works with open web standards (SVG). For all and empowered by the community.
Graphviz is open source graph visualization software. It has several main graph layout programs. It also has web and interactive graphical interfaces, and auxiliary tools, libraries, and language bindings.
OmniGraffle can help you make eye-popping graphic documents—quickly—by providing powerful styling tools, keeping lines connected to shapes even when they’re moved, and magically organizing diagrams with just one click.
Maltego is an open source intelligence and forensics application. It will offer you timous mining and gathering of information as well as the representation of this information in a easy to understand format.
Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web.
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Most users think Cytoscape is a great alternative to Gephi.
Social Network Visualizer (SocNetV) is a cross-platform, user-friendly application for the analysis and visualization of Social Networks in the form of mathematical graphs, where vertices depict actors/agents and edges represent their relations.