AliView is yet another alignment viewer and editor, but this is probably one of the fastest and most intuitive to use, not so bloated and hopefully to your liking.
Cost / License
- Free
- Open Source
Platforms
- Mac
- Windows
- Linux




AliView is yet another alignment viewer and editor, but this is probably one of the fastest and most intuitive to use, not so bloated and hopefully to your liking.




BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP/7. An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences relatively easy on your desktop computer.








Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!




DNADynamo - for Windows, OSX and Linux. Download it now for abi/scf trace alignments, sub cloning and plasmid management, blast/sequence retrieval, sequence annotation and structure viewing - all in one integrated and easy to use bioinformatics program.
GENtle is a software for DNA and amino acid editing, database management, plasmid maps, restriction and ligation, alignments, sequencer data import, calculators, gel image display, PCR, and much more.

DNA Baser Sequence Assembler is revolutionary bioinformatics software for manual and automatic DNA sequence assembly , DNA sequence analysis, contig editing, file format conversion and mutation detection.

Clustal Omega is a multiple sequence alignment program. It produces biologically meaningful multiple sequence alignments of divergent sequences. Evolutionary relationships can be seen via viewing Cladograms or Phylograms.
Mendelgen is an online DNA vector editing and manipulation tool. It offers features like MSA alignment, codon optimization, feature detection, and more. It's wrapped in a beautiful and intuitive design to make your experience easy and enjoyable.



4Peaks - For Peaks, Four Peaks. The award winning 4Peaks helps molecular biologists to visualize and edit their DNA sequence trace files. Analyzing your sequence has never been so much fun!




Clone Manager is a commercial bioinformatics software work suite of Sci-Ed, that supports molecular biologists with data management and allows to perform certain in silico preanalysis.
GeneStudio Pro is a modern suite of molecular biology applications for the Windows platform built on our sequence format conversion engine, SeqVerter. All manipulations with sequences of different formats are thus seamless and transparent for the user.