Apps tagged with 'sequence-alignment'

All apps in Apps tagged with 'sequence-alignment' category. Use the filters below to narrow down your search. 
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  1. AliView icon
     3 likes

    AliView is yet another alignment viewer and editor, but this is probably one of the fastest and most intuitive to use, not so bloated and hopefully to your liking.

    Cost / License

    • Free
    • Open Source

    Platforms

    • Mac
    • Windows
    • Linux
    Unlimited mouse wheel zoom in/out to see whole alignment
    Alternative Color schemes (SeaView)
    ClustalX consensus color scheme
    +1
    View nucleotides colored as translated Amino Acids
    4 alternatives
  2. BioEdit icon
     2 likes

    BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP/7. An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences relatively easy on your desktop computer.

    Cost / License

    • Free
    • Proprietary

    Alerts

    • Discontinued

    Platforms

    • Windows
    BioEdit screenshot 1
    BioEdit screenshot 1
    BioEdit screenshot 2
    +2
    BioEdit screenshot 3
    28 alternatives
  3. UGENE icon
     3 likes

    UGENE is free open-source cross-platform bioinformatics software.

    Cost / License

    • Free
    • Open Source

    Platforms

    • Mac
    • Windows
    • Linux
    UGENE screenshot 1
    UGENE screenshot 1
    UGENE screenshot 2
    +4
    UGENE screenshot 3
    25 alternatives
  4. Geneious icon
     1 like

    Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    Geneious screenshot 1
    Geneious screenshot 1
    Geneious screenshot 2
    +1
    Geneious screenshot 3
    28 alternatives
  5. DNADynamo icon
     3 likes

    DNADynamo - for Windows, OSX and Linux. Download it now for abi/scf trace alignments, sub cloning and plasmid management, blast/sequence retrieval, sequence annotation and structure viewing - all in one integrated and easy to use bioinformatics program.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Mac
    • Windows
    • Linux
    26 alternatives
  6. GENtle icon
     2 likes

    GENtle is a software for DNA and amino acid editing, database management, plasmid maps, restriction and ligation, alignments, sequencer data import, calculators, gel image display, PCR, and much more.

    Cost / License

    • Free
    • Open Source

    Platforms

    • Mac
    • Windows
    • Linux
    The expression vector pCAGGS-T7 opened in GENtle
    4 alternatives
  7. DNA Baser icon
     1 like

    DNA Baser Sequence Assembler is revolutionary bioinformatics software for manual and automatic DNA sequence assembly , DNA sequence analysis, contig editing, file format conversion and mutation detection.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Windows
    DNA Baser screenshot 1
    3 alternatives
  8. Clustal Omega is a multiple sequence alignment program. It produces biologically meaningful multiple sequence alignments of divergent sequences. Evolutionary relationships can be seen via viewing Cladograms or Phylograms.

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Online
    3 alternatives
  9. Mendelgen icon
     3 likes

    Mendelgen is an online DNA vector editing and manipulation tool. It offers features like MSA alignment, codon optimization, feature detection, and more. It's wrapped in a beautiful and intuitive design to make your experience easy and enjoyable.

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Online
    View your plasmid maps in dark mode
    Simulate gels
    Easy-to-use DNA editing
    29 alternatives
  10. 4peaks icon
     1 like

    4Peaks - For Peaks, Four Peaks. The award winning 4Peaks helps molecular biologists to visualize and edit their DNA sequence trace files. Analyzing your sequence has never been so much fun!

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Mac
    4peaks screenshot 1
    23 alternatives
  11.  1 like

    MacVector is a comprehensive Macintosh application that provides sequence editing, primer design, cloning and designing constructs, internet database searching, protein analysis, sequence confirmation, multiple sequence alignment, phylogenetic reconstruction, coding region...

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Mac
    MacVector screenshot 1
    MacVector screenshot 1
    MacVector screenshot 2
    6 alternatives
  12. Clone Manager is a commercial bioinformatics software work suite of Sci-Ed, that supports molecular biologists with data management and allows to perform certain in silico preanalysis.

    Cost / License

    • Paid
    • Proprietary

    Platforms

    • Windows
    2 alternatives
  13. DNAssist icon
     Like

    DNAssist provides an intuitive, single interface within which sequence files are displayed, edited and analyzed. The user can customize the display in editor windows by selecting the font, font size, and line length.

    Cost / License

    Platforms

    • Windows
    DNAssist screenshot 1
    13 alternatives
  14. GeneStudio Pro is a modern suite of molecular biology applications for the Windows platform built on our sequence format conversion engine, SeqVerter. All manipulations with sequences of different formats are thus seamless and transparent for the user.

    Cost / License

    • Free
    • Proprietary

    Platforms

    • Windows
    25 alternatives
  15.  Like

    Boxshade is a program for creating good-looking printouts from alignments of multiple protein or DNA sequences. The program does no alignment by itself, it takes as input a file preprocessed by a multiple alignment program or a multiple sequence editor, such as ClustalOmega.

    Cost / License

    Platforms

    • Mac
    • Windows
    • Linux
    • Online
    4 alternatives