AliView is yet another alignment viewer and editor, but this is probably one of the fastest and most intuitive to use, not so bloated and hopefully to your liking.
Cost / License
- Free
- Open Source
Platforms
- Mac
- Windows
- Linux




GeneDoc is described as 'A full featured multiple sequence alignment editor, analyser and shading utility for Windows' and is an app. There are six alternatives to GeneDoc for a variety of platforms, including Mac, Windows, Linux, Web-based and Self-Hosted apps. The best GeneDoc alternative is AliView, which is both free and Open Source. Other great apps like GeneDoc are Genophore, UGENE, Geneious and Clustal X.
AliView is yet another alignment viewer and editor, but this is probably one of the fastest and most intuitive to use, not so bloated and hopefully to your liking.




Genophore is an application for searching and designing proteins. It also provides a suite of bioinformatics utilities and collaboration tools.







Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!




QIAGEN CLC Main Workbench is ideal for DNA, RNA, & protein sequence data analysis with a wide variety of features, no advanced computer skills required! The workbench is available for Windows, Mac OS X, and Linux platforms.
