Crowdsourced software recommendations

3 Like

Jmol

Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry...

Free Open Source
Mac
Windows
Linux

Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry. It is cross-platform, running on Windows, Mac OS X, and Linux/Unix systems.

The JmolApplet is a web browser applet that can be integrated into web pages.
The Jmol application is a standalone Java application that runs on the desktop.
The JmolViewer is a development tool kit that can be integrated into other Java applications. More Info »

Link to official Jmol site

Official Website

Features

No features added Add a feature

Category

Education & Reference

Tags

visualization chemistry molecular-dynamics proteins

Jmol was added by saurabhgayali in Oct 2012 and the latest update was made in Dec 2018. The list of alternatives was updated Aug 2018 There is a history of all activites on Jmol in our Activity Log. It's possible to update the information on Jmol or report it as discontinued, duplicated or spam.

Acetic acid using CPK colors and spacefilled atoms.

Display of bounding box and axes of coordinates space. Note the transparency of the yellow halo around selected atoms.

The electrostatic potential of allene mapped onto a translucent surface

An SN2 reaction animation with the distance measured between the chlorine and carbon atoms

Crystal structure of an H/ACA box RNP from Pyrococcus furiosus

MORE APP INFO Official website

Reviews 2

Alternatives to Jmol for all platforms with any license

Rasmol

RasMol is a computer program written for molecular graphics visualization intended and used primarily for the depiction and exploration of biological macromolecule...

Free Open Source Mac Windows Linux
No features added Add a feature

2 Like
Avogadro

Avogadro is a free, fantastically easy to use molecule editor. Because this editor is cross platform and light on computer resources, you know you can run it when...

Free Open Source Mac Windows Linux
No features added Add a feature

11 Like
pymol

PyMOL is a powerful and comprehensive molecular visualization product for rendering and animating 3D molecular structures.

Commercial Mac Windows Linux
No features added Add a feature

1 Like
UCSF Chimera

UCSF Chimera is a highly extensible program for interactive visualization and analysis of molecular structures and related data.

Free Mac Windows Linux
No features added Add a feature

1 Like
VMD - Visual Molecular Dynamics

VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.

Free Open Source Mac Windows Linux
No features added Add a feature

1 Like
Calistry.org

Calistry is an online Chemistry Calculator. Till date Calistry contains 70+ calculators in the field of Chemistry. Everything in the website is entirely free to use....

Free Web Android
No features added Add a feature

4 Like
Ghemical

Ghemical is computational chemistry package, which is licensed under GNU GPL . The ghemical authors are listed here . Ghemical is implemented using the C++...

Free Mac Windows
No features added Add a feature

0 Like
RasTop

RasTop is a molecular visualization software adapted from the program RasMol, which was initially developed by Roger Sayle. RasTop is particularly adapted for...

Free Open Source Mac Windows Linux Wine
No features added Add a feature

0 Like

Jmol Comments

Echo echo ... Feels empty in here

Maybe you want to be the first to submit a comment about Jmol? Just click the button up to your right!