Alternatives to UGENE for all platforms with any license

  • Vector NTI icon

    Vector NTI

    Vector NTI is a bioinformatics software package. The current versions are v11.5.1 for Windows/PCs and v7.1 for Macs, but only supporting Mac OS X v10.3 (Panther).Features create, annotate, analyse, and share DNA/protein sequences...

    Commercial Mac Windows

  • Geneious icon

    Geneious

    Geneious combines all the major DNA and protein sequence analysis tools into one revolutionary software solution!

    Commercial Mac Windows Linux

  • SnapGene Viewer icon

    SnapGene Viewer

    SnapGene Viewer is revolutionary software that allows molecular biologists to create, browse, and share richly annotated DNA sequence files up to 1 Gb in length. .

    Free Personal Mac Windows Linux

  • Rasmol icon

    Rasmol

    RasMol is a computer program written for molecular graphics visualization intended and used primarily for the depiction and exploration of biological macromolecule structures, such as those found in the Protein Data Bank. It was...

    Open Source Mac Windows Linux

  • TreeView X icon

    TreeView X

    TreeView X is an open source program to display phylogenetic trees on Linux, Unix, Mac OS X, and Windows platforms. It can read and display NEXUS and Newick format tree files (such as those output by PAUP*...

    Free Mac Windows Linux

  • Ridom TraceEdi icon

    Ridom TraceEdi

    Ridom TraceEdit is a cross-platform graphical DNA trace viewer and editor. TraceEdit displays the chromatogram files from Applied Biosystems automated sequencers and files in the Staden SCF format.

    Free Windows Linux

  • Clustal X icon

    Clustal X

    Multiple sequence alignment software.

    Free Mac Windows Linux

  • TreeView icon

    TreeView

    Tree drawing software for Apple Macintosh and Windows.

    Free Mac Windows Linux

  • GeneDoc icon

    GeneDoc

    A full featured multiple sequence alignment editor, analyser and shading utility for Windows. • Data analysis and visualization • Score assisted manual alignment • Paginated printouts • Windows based • Highly configurable •...

    Free Windows

  • Archaeopteryx

    Archaeopteryx is a software tool for the visualization, analysis, and editing of potentially large and highly annotated phylogenetic trees.

    Free Mac Windows Linux Java

  • DNASTAR Lasergene icon

    DNASTAR Lasergene

    The DNASTAR Lasergene package is the most robust of our software offerings, and includes all of the applications from our genomics, structural biology, molecular biology, and cloning suites. Whether your work focuses on next-gen...

    Commercial Mac Windows Linux

  • CLC bio icon

    CLC bio

    DNA analysis for the workbench.

    Commercial Windows

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  • DNApy icon

    DNApy

    A free and open source GUI toolkit for DNA editing - written in python This project aims to provide a powerful codebase for viewing, editing and creating DNA in the GenBank format. The code is free to use, modify and re-distribute...

    Open Source Mac Windows Linux

  • Chromas icon

    Chromas

    Two software applications are available from Technelysium: Chromas and ChromasPro. Chromas is a simple, easy-to-use viewer and editor for sequencing chromatograms. Chromas is ideal for the most basic of sequencing projects, where...

    Freemium Windows

  • Serial Cloner icon

    Serial Cloner

    Serial Cloner is a Molecular Biology software. It provides tools with an intuitive interface that assists you in DNA cloning, sequence analysis and visualization.

    Free Mac Windows Linux

    • Discontinued Last version, 2.6.1, was released on April 3rd, 2013.
  • RasTop icon

    RasTop

    RasTop is a molecular visualization software adapted from the program RasMol, which was initially developed by Roger Sayle. RasTop is particularly adapted for educational purposes and for the rapid analysis of macromolecules at the...

    Open Source Mac Windows Linux Wine

  • PDRAW32 icon

    PDRAW32

    Scientific software for the molecular biologist. Performs virtual DNA cloning, analyses DNA for restriction enzymes, homing enzymes and primer sites, dam and dcm methylation sites, finds and translates open reading frames. Calculates...

    Freemium Mac Windows Linux

  • BioEdit icon

    BioEdit

    BioEdit is a biological sequence alignment editor written for Windows 95/98/NT/2000/XP/7. An intuitive multiple document interface with convenient features makes alignment and manipulation of sequences relatively easy on your...

    Free Windows

    • Discontinued The program is no longer maintained. Last version, 7.2.5, released in December 2013, can be still downloaded from the official website.
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  • MacVector

    MacVector is a comprehensive Macintosh application that provides sequence editing, primer design, cloning and designing constructs, internet database searching, protein analysis, sequence confirmation, multiple sequence alignment...

    Commercial Mac

  • GeneStudio icon

    GeneStudio

    GeneStudio Pro is a modern suite of molecular biology applications for the Windows platform built on our sequence format conversion engine, SeqVerter. All manipulations with sequences of different formats are thus seamless and...

    Free Windows

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